The detailed information of tRNA gene sequence


Sequence ID>WENV170209532
Genome IDCEPV01067506
Search identical group
Phylum/Class[CEPV] marine metagenome genome assembly TARA_039_MES_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 79
End posion on genome 3
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position
tcttttaaaT
tRNA gene sequence
GGGCTTGTGGTCTAGTGGCTATGACATCTCCCTTACAAGGAGAAGGTCGCAGGTTCGAGT
CCTGCCAGGCCCATCA
Downstream region at tRNA end position
acnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170209532	Val	TAC
                   T      ATCA acnnnnnnnn
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     T - A
                     G - C          T G
                    T     C G T C C     A
      T G A        G      | | | | |     G
    G       T C T G       G C A G G     C
    G         | | |                 T T
    C       T G A C
      T A          A     AGGTC
                    T - A
                    C - G
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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