The detailed information of tRNA gene sequence


Sequence ID>WENV170209568
Genome IDCEPV01070208
Search identical group
Phylum/Class[CEPV] marine metagenome genome assembly TARA_039_MES_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 196
End posion on genome 291
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
ccagaattac
tRNA gene sequence 
GGAGGAGGATCGGATCCCGGTGGACCGCACGGGCTTCAAACCCGTTGGGACGCGCCAGGC
GTGTTTGGTGGGTTCGACTCCCACCCTCTTCCGCCA
Downstream region at tRNA end position 
tgattagagt
Secondary structure (Cloverleaf model)
>WENV170209568	SeC	TCA
                   c      GCCA tgattagagt
                     G - C
                     G - C
                     A - T
                     G + T
                     G - C
                     A - T
                     G - C
                     G - C          T C
                    A     C A C C C     A
      C C T        T      | | | | |     G
    C       A G G C       G T G G G     C
    G         | | |                 T T
    G       A C C G
      T G G        C     TGGGACGCGCCAGGCGTGTTTG
                    A - T
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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