The detailed information of tRNA gene sequence


Sequence ID>WENV170209614
Genome IDCEPV01074655
Search identical group
Phylum/Class[CEPV] marine metagenome genome assembly TARA_039_MES_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 347
End posion on genome 274
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position
cgcccttttt
tRNA gene sequence
GGGCCCATAGCTCAACGGTTAGAGCACCGCACTCATAATGCGTAGGTTCGGGGTTCGAAT
CCCTGTGGGCCCACtg
Downstream region at tRNA end position
ttatctaatc
Secondary structure (Cloverleaf model)
>WENV170209614	Met	CAT
                   t      ACtg ttatctaatc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     G T C C C     A
      C A A        A      | + | | |     G
    G       C T C G       C G G G G     C
    G       | | | |                 T T
    T       G A G C
      T A          A     AGGTT
                    C   T
                    C - G
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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