The detailed information of tRNA gene sequence


Sequence ID>WENV170209643
Genome IDCEPV01076749
Search identical group
Phylum/Class[CEPV] marine metagenome genome assembly TARA_039_MES_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 792
End posion on genome 889
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
aaatttgtgc
tRNA gene sequence 
GGAAGTGCGCGGCTCACTGGTGGGGCCCTCGGACTTCAAATCCGATGTGGGGTGCTAAAA
CCGCCCCGGGTAGGTTCGATTCCTATGCACTTCCGCCA
Downstream region at tRNA end position 
cagttttttt
Secondary structure (Cloverleaf model)
>WENV170209643	SeC(p)	TCA
                   c      GCCA cagttttttt
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T - A
                     G - C
                     C - G          T T
                    G     T A T C C     A
      C A C        C      + | | | |     G
    T       T C G G       G T A G G     C
    G       + | | |                 T T
    G       G G C C
      T G G        C     TGTGGGGTGCTAAAACCGCCCCGG
                    T - A
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK