The detailed information of tRNA gene sequence


Sequence ID>WENV170212136
Genome IDCEPW01149428
Search identical group
Phylum/Class[CEPW] marine metagenome genome assembly TARA_038_DCM_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 237
End posion on genome 330
Amino Acid Ile
Anticodon TAT
Upstream region at tRNA start position
aaagtaaaat
tRNA gene sequence
AGTCCTGTAGTTTAATGGTAAAACACCCGGCTTATACTCGGCACAGTCTCCAGATTAGAG
AGCGATGTGGGTTCGACTCCCGCCAGGACTACCA
Downstream region at tRNA end position
aaggctccgt
Secondary structure (Cloverleaf model)
>WENV170212136	Ile	TAT
                   t      ACCA aaggctccgt
                     A - T
                     G - C
                     T - A
                     C - G
                     C - G
                     T - A
                     G - C          T C
                    T     C G C C C     A
        A A        A      | + | | |     G
      T     T T T G       G T G G G     C
      G     | | | |                 T T
      G     A A A C
        T A        A     ACAGTCTCCAGATTAGAGAGCGAT
                    C   C
                    C - G
                    C - G
                    G - C
                    G + T
                  C       C
                  T       A
                    T A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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