The detailed information of tRNA gene sequence


Sequence ID>WENV170213497
Genome IDCEPX01033301
Search identical group
Phylum/Class[CEPX] marine metagenome genome assembly TARA_037_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 294
End posion on genome 220
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cgctgcgctc
tRNA gene sequence 
AGCGGCGTAGGGTAGTGGCAACCCGTCTGGCTCATAACCAGGACTACGCAGGTTCGAGTC
CTGCCGCCGCGACCA
Downstream region at tRNA end position 
cttgtgaatc
Secondary structure (Cloverleaf model)
>WENV170213497	Met	CAT
                   c      ACCA cttgtgaatc
                     A   G
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     C G T C C     A
        G A        A      | | | | |     G
      T     T G G G       G C A G G     C
      G     | | | |                 T T
      G     A C C C
        C A        G     ACTAC
                    T + G
                    C - G
                    T - A
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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