The detailed information of tRNA gene sequence


Sequence ID>WENV170214458
Genome IDCEPX01087227
Search identical group
Phylum/Class[CEPX] marine metagenome genome assembly TARA_037_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 254
End posion on genome 179
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
catttaattt
tRNA gene sequence 
GCCGCGGTAGCTCAGTCGGTAGAGCAATGGACTGAAAATCCATGTGTCGGCGGTTCGATT
CCGCCCTGCGGCACCT
Downstream region at tRNA end position 
ttttatattt
Secondary structure (Cloverleaf model)
>WENV170214458	Phe	GAA
                   t      ACCT ttttatattt
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     G + T
                     G - C          T T
                    T     C C G C C     A
      T G A        A      | | | | |     G
    C       C T C G       G G C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    A - T
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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