The detailed information of tRNA gene sequence


Sequence ID>WENV170215195
Genome IDCEPX01135158
Search identical group
Phylum/Class[CEPX] marine metagenome genome assembly TARA_037_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 299
End posion on genome 227
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
ttaggagtac
tRNA gene sequence 
GGGCCTGTGATTCAATCCGGTAGAATACGCCCATGGCATGGGTGCTATCCGAGTTCAAAT
CTCGGCAGGTCCAttt
Downstream region at tRNA end position 
aactttcaat
Secondary structure (Cloverleaf model)
>WENV170215195	Ala	GGC
                   c      Attt aactttcaat
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     G G C T C     A
      T A A        G      | | | | |     A
    C       C T T A       C C G A G     C
    C       | | | |                 T T
    G       G A A T
      G T A        A     CTAT
                    C - G
                    G + T
                    C - G
                    C - G
                    C - G
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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