The detailed information of tRNA gene sequence


Sequence ID>WENV170217410
Genome IDCEPX01388500
Search identical group
Phylum/Class[CEPX] marine metagenome genome assembly TARA_037_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 312
End posion on genome 389
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position
gatttatttt
tRNA gene sequence
GCTCGATTAGCTCAGTCAGGCCAGAGCACATGTTTTACATGCATGGTGTCGAAGGTTCGA
ATCCTTCATCGAGTACCA
Downstream region at tRNA end position
actttaatac
Secondary structure (Cloverleaf model)
>WENV170217410	Val	TAC
                   t      ACCA actttaatac
                     G + T
                     C - G
                     T - A
                     C - G
                     G - C
                     A - T
                     T - A          T A
                    T     C T T C C     A
    C T G A        A      | | | | |     G
  A         C T C G       G A A G G     C
  G         | | | |                 T T
  G         G A G C
    C C A          A     GTGTC
                    C - G
                    A - T
                    T - A
                    G - C
                    T + G
                  T       T
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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