The detailed information of tRNA gene sequence


Sequence ID>WENV170217621
Genome IDCEPX01404956
Search identical group
Phylum/Class[CEPX] marine metagenome genome assembly TARA_037_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 20
End posion on genome 108
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gtaatttaat
tRNA gene sequence 
GGAGGGTTGGCTGAGTGGTTAAAGGCGGTGGTTTCGAAAACCATTGGGCTGCAAAGTCCG
CACAGGTTCGAATCCTGTACCCTCCGCCT
Downstream region at tRNA end position 
tgcttcgcca
Secondary structure (Cloverleaf model)
>WENV170217621	Ser	CGA
                   t      GCCT tgcttcgcca
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     T - A          T A
                    T     T G T C C     A
      T G A        G      | | | | |     G
    G       G T C G       A C A G G     C
    G         + | |                 T T
    T       A G G C
      T A A        G     TGGGCTGCAAAGTCCGC
                    G + T
                    T - A
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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