The detailed information of tRNA gene sequence


Sequence ID>WENV170217983
Genome IDCEPY01003960
Search identical group
Phylum/Class[CEPY] marine metagenome genome assembly TARA_039_SRF_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1320
End posion on genome 1239
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
atttaattag
tRNA gene sequence 
GCCAAGGTCGCATAGCCTGGTATTGCGCAGGATTGCTAATCCTGTCCCATTGGGATCGCG
GGTTCAAATCCCGTCCTTGGCGttt
Downstream region at tRNA end position 
aatttttata
Secondary structure (Cloverleaf model)
>WENV170217983	Ser	GCT
                   g      Gttt aatttttata
                     G - C
                     C - G
                     C - G
                     A - T
                     A - T
                     G - C
                     G - C          T A
                    T     T G C C C     A
      C G A        C      + | | | |     A
    C       T A C G       G C G G G     C
    T         | | |                 T T
    G       T T G C
      G T A        G     TCCCATTGGGATC
                    C - G
                    A - T
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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