The detailed information of tRNA gene sequence


Sequence ID>WENV170218121
Genome IDCEPY01021338
Search identical group
Phylum/Class[CEPY] marine metagenome genome assembly TARA_039_SRF_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 186
End posion on genome 113
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
actatcattt
tRNA gene sequence 
AGACAATTAGTATAGTGGTATTATGTTGGACTCCAAATCCAAAGACTAAGGTTCGATTCC
TTGATTGTCTGCCA
Downstream region at tRNA end position 
aatttattta
Secondary structure (Cloverleaf model)
>WENV170218121	Trp	CCA
                   t      GCCA aatttattta
                     A - T
                     G - C
                     A - T
                     C - G
                     A - T
                     A - T
                     T - A          T T
                    T     G T T C C     A
        G A        A      + | | | |     G
      T     T A T G       T A A G G     C
      G       | | +                 T T
      G     T T A T
        T A        G     AGAC
                    T - A
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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