The detailed information of tRNA gene sequence


Sequence ID>WENV170218145
Genome IDCEPY01025617
Search identical group
Phylum/Class[CEPY] marine metagenome genome assembly TARA_039_SRF_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 112
End posion on genome 23
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gccgtgatgt
tRNA gene sequence 
GGAGAGATGGCCGAGTGGCTGAAGGCGCGCCCCTGCTAAGGGCGTATAGGTTTACCCCTA
TCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
cgttctttct
Secondary structure (Cloverleaf model)
>WENV170218145	Ser	GCT
                   t      GCCA cgttctttct
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATAGGTTTACCCCTATC
                    C - G
                    G - C
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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