The detailed information of tRNA gene sequence


Sequence ID>WENV170218189
Genome IDCEPY01030091
Search identical group
Phylum/Class[CEPY] marine metagenome genome assembly TARA_039_SRF_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 445
End posion on genome 353
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aagaacattt
tRNA gene sequence 
GGAGAGTACCGCTGAGTTGGTCGGCAGCTTGTCTTGAAAACAAGAGGTGTCCGTGAAGAA
TGGGCAGGGGTTCGACTCCTCTACTCTCCGCCA
Downstream region at tRNA end position 
agttcactat
Secondary structure (Cloverleaf model)
>WENV170218189	Ser	TGA
                   t      GCCA agttcactat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T C
                    A     T C T C C     A
      G A G        C      | | + | |     G
    T       T C G C       A G G G G     C
    T       + | |                   T T
    G       G G C A
      G T C        G     AGGTGTCCGTGAAGAATGGGC
                    C - G
                    T - A
                    T - A
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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