The detailed information of tRNA gene sequence


Sequence ID>WENV170218861
Genome IDCEPZ01026325
Search identical group
Phylum/Class[CEPZ] marine metagenome genome assembly TARA_039_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 140
End posion on genome 216
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position
aataaattat
tRNA gene sequence
GGGCTTCTAGCTCAATCGGTTAGAGCATCGGCCTCATAAGCCGCAGGTTCGGGGTTCGAT
CCCCCGGGAGCCTACCA
Downstream region at tRNA end position
aatattttga
Secondary structure (Cloverleaf model)
>WENV170218861	Met	CAT
                   t      ACCA aatattttga
                     G + T
                     G - C
                     G - C
                     C - G
                     T - A
                     T + G
                     C - G          C T
                    T     G C C C C     A
      T A A        A      | | | | |     G
    C       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTT
                    T   C
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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