The detailed information of tRNA gene sequence


Sequence ID>WENV170219412
Genome IDCEPZ01062437
Search identical group
Phylum/Class[CEPZ] marine metagenome genome assembly TARA_039_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 570
End posion on genome 498
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position
gtgtttatag
tRNA gene sequence
GCCTCTGTAGATTAATGGTTAAATCACCTGTCTCATAAGCAGGAGATTGCGGGTTCAATT
CCCGCCAGAGGCAtta
Downstream region at tRNA end position
atcaccataa
Secondary structure (Cloverleaf model)
>WENV170219412	Met	CAT
                   g      Atta atcaccataa
                     G - C
                     C - G
                     C - G
                     T - A
                     C - G
                     T - A
                     G - C          T T
                    T     C G C C C     A
      T A A        A      | | | | |     A
    G       T T A G       G C G G G     C
    G       | | | |                 T T
    T       A A T C
      T A          A     AGATT
                    C - G
                    C - G
                    T - A
                    G - C
                    T + G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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