The detailed information of tRNA gene sequence


Sequence ID>WENV170219707
Genome IDCEPZ01077478
Search identical group
Phylum/Class[CEPZ] marine metagenome genome assembly TARA_039_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 298
End posion on genome 224
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position
ttgtttataT
tRNA gene sequence
GCCTCCATAGCTCAGTTGGTAGAGTGCAGGTTTCATGAGCCTGAGGTCGTGGGTTCGATC
CCCACTGGAGGCATta
Downstream region at tRNA end position
atcaccatag
Secondary structure (Cloverleaf model)
>WENV170219707	Met	CAT
                   T      ATta atcaccatag
                     G - C
                     C - G
                     C - G
                     T - A
                     C - G
                     C - G
                     A - T          C T
                    T     C A C C C     A
      T G A        A      | | | | |     G
    T       C T C G       G T G G G     C
    G       | | | +                 T T
    G       G A G T
      T A          G     AGGTC
                    C - G
                    A - T
                    G - C
                    G - C
                    T + G
                  T       A
                  T       G
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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