The detailed information of tRNA gene sequence


Sequence ID>WENV170220141
Genome IDCEPZ01092181
Search identical group
Phylum/Class[CEPZ] marine metagenome genome assembly TARA_039_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 340
End posion on genome 413
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position
taaaattatT
tRNA gene sequence
GGGCCTGTCGTATAATGGTTATTATTTTCGGCTGGCAGTCGAGAGATCCGGGTTCGATTC
CCGGCAGGTCCATac
Downstream region at tRNA end position
aacttttctt
Secondary structure (Cloverleaf model)
>WENV170220141	Ala	GGC
                   T      ATac aacttttctt
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     T - A
                     G - C          T T
                    T     G G C C C     A
      T A A        C      | | | | |     G
    G       T A T G       C C G G G     C
    G         | | +                 T T
    T       T T A T
      T A          T     AGAT
                    T + G
                    T - A
                    C - G
                    G - C
                    G + T
                  C       G
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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