The detailed information of tRNA gene sequence


Sequence ID>WENV170220193
Genome IDCEPZ01105409
Search identical group
Phylum/Class[CEPZ] marine metagenome genome assembly TARA_039_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 199
End posion on genome 124
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ggatttacca
tRNA gene sequence 
GGGCCCTTAGCTCAACGGTCAGAGCATCTGGCTCATAACCAGGCGGTTCTGGGTTCGAAT
CCCGGAGGGCCCACCA
Downstream region at tRNA end position 
aaaatggata
Secondary structure (Cloverleaf model)
>WENV170220193	Met	CAT
                   a      ACCA aaaatggata
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A          T A
                    T     G G C C C     A
      C A A        A      | + | | |     G
    G       C T C G       C T G G G     C
    G       | | | |                 T T
    T       G A G C
      C A          A     CGGTT
                    T + G
                    C - G
                    T - A
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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