The detailed information of tRNA gene sequence


Sequence ID>WENV170220201
Genome IDCEPZ01108442
Search identical group
Phylum/Class[CEPZ] marine metagenome genome assembly TARA_039_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 307
End posion on genome 231
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position
ggggttccac
tRNA gene sequence
GGGCCTGTAGCTCAAGCGGATCAGAGCACCGGGCTTCTACCCCGGCGGTCCCGGTTCGAG
TCCGGGCAGGCTCTCCA
Downstream region at tRNA end position
tctcccgacc
Secondary structure (Cloverleaf model)
>WENV170220201	Arg	TCT
                   c      TCCA tctcccgacc
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T G
                    T     G G G C C     A
    C G A A        A      | | | | |     G
  G         C T C G       C C C G G     C
  G         | | | |                 T T
  A         G A G C
    T C A          A     CGGT
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       C
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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