The detailed information of tRNA gene sequence


Sequence ID>WENV170220245
Genome IDCEPZ01124516
Search identical group
Phylum/Class[CEPZ] marine metagenome genome assembly TARA_039_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 174
End posion on genome 249
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position
gtcccactaT
tRNA gene sequence
GGGCTCGTAGCTCAACCTGGTAGAGCGCCCGCTTTGCACGTGGGAGGCTAGGTGTTCGAA
TCACCTCGAGTCCATtg
Downstream region at tRNA end position
taagggcccg
Secondary structure (Cloverleaf model)
>WENV170220245	Ala	TGC
                   T      ATtg taagggcccg
                     G - C
                     G - C
                     G + T
                     C - G
                     T - A
                     C - G
                     G - C          T A
                    T     T C C A C     A
      C A A        A      | | | | |     G
    C       C T C G       A G G T G     C
    T       | | | |                 T T
    G       G A G C
      G T A        G     AGGCT
                    C - G
                    C - G
                    C - G
                    G + T
                    C - G
                  T       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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