The detailed information of tRNA gene sequence


Sequence ID>WENV170220319
Genome IDCEPZ01142460
Search identical group
Phylum/Class[CEPZ] marine metagenome genome assembly TARA_039_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 227
End posion on genome 152
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position
gtaattcttT
tRNA gene sequence
GCCCTCGTAGCATAATAGGACAATGCAATGGCCTTCTAAGCCATAGATTCTTGGTTCAAA
TCCAAGCGGGGGTGTtt
Downstream region at tRNA end position
atgttattgg
Secondary structure (Cloverleaf model)
>WENV170220319	Arg	TCT
                   T      GTtt atgttattgg
                     G + T
                     C - G
                     C - G
                     C - G
                     T + G
                     C - G
                     G - C          T A
                    T     G A A C C     A
      T A A        A      | | | | |     A
    A       T A C G       C T T G G     C
    G       | | | |                 T T
    G       A T G C
      A C A        A     AGATT
                    A - T
                    T - A
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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