The detailed information of tRNA gene sequence


Sequence ID>WENV170220331
Genome IDCEPZ01145228
Search identical group
Phylum/Class[CEPZ] marine metagenome genome assembly TARA_039_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 560
End posion on genome 636
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gattgtaaat
tRNA gene sequence 
GGCTACATAGCTCAGCTGGTTAGAGCACATCACTCATAATGATGGGGTCCCAGGTTCAAA
TCCCGGTGTTGCCACCA
Downstream region at tRNA end position 
cttattctaa
Secondary structure (Cloverleaf model)
>WENV170220331	Met	CAT
                   t      ACCA cttattctaa
                     G - C
                     G - C
                     C - G
                     T   T
                     A - T
                     C - G
                     A - T          T A
                    T     G G C C C     A
      C G A        A      | |   | |     A
    T       C T C G       C C A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    A - T
                    T - A
                    C - G
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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