The detailed information of tRNA gene sequence


Sequence ID>WENV170220404
Genome IDCEPZ01157156
Search identical group
Phylum/Class[CEPZ] marine metagenome genome assembly TARA_039_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 388
End posion on genome 461
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position
ttatcaatca
tRNA gene sequence
GGGGTCGTAGTATAGCCTGGTTAGTACACGAGCTTTGGGAGTTCGTAACGCCAGTTCGAA
TCTGGCCGACCCCAttt
Downstream region at tRNA end position
aaattcacaa
Secondary structure (Cloverleaf model)
>WENV170220404	Pro	TGG
                   a      Attt aaattcacaa
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     G - C          T A
                    T     C G G T C     A
    C C G A        A      | | | | |     G
  T         T A T G       G C C A G     C
  G         + | | |                 T T
  G         G T A C
    T T A          A     TAAC
                    C - G
                    G - C
                    A - T
                    G + T
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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