The detailed information of tRNA gene sequence


Sequence ID>WENV170220409
Genome IDCEPZ01158249
Search identical group
Phylum/Class[CEPZ] marine metagenome genome assembly TARA_039_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 139
End posion on genome 67
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position
gctccactat
tRNA gene sequence
AGCGCATTAGAGTAATTGGTAACTCGCTGGTCTCATAAGCCAGAGCTTGTAGTTCGAGTC
TACAGTGCGCTACtt
Downstream region at tRNA end position
tacttactga
Secondary structure (Cloverleaf model)
>WENV170220409	Met	CAT
                   t      ACtt tacttactga
                     A - T
                     G - C
                     C - G
                     G - C
                     C - G
                     A - T
                     T + G          T G
                    T     A C A T C     A
      T A A        A      | | | | |     G
    T       T G A G       T G T A G     C
    G       | | | |                 T T
    G       A C T C
      T A          G     AGCT
                    C - G
                    T - A
                    G - C
                    G - C
                    T + G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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