The detailed information of tRNA gene sequence


Sequence ID>WENV170220482
Genome IDCEPZ01173496
Search identical group
Phylum/Class[CEPZ] marine metagenome genome assembly TARA_039_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 338
End posion on genome 414
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position
acataatagt
tRNA gene sequence
ACTGGTGTAGCTCAGATGGCTAGAGTATATGGCTCATAACTATAAAGTCGGGGGTTCGAA
TCCCCCCATCAGTACCA
Downstream region at tRNA end position
ttcactttaa
Secondary structure (Cloverleaf model)
>WENV170220482	Met	CAT
                   t      ACCA ttcactttaa
                     A - T
                     C - G
                     T - A
                     G - C
                     G + T
                     T - A
                     G - C          T A
                    T     C C C C C     A
      A G A        A      | | | | |     G
    T       C T C G       G G G G G     C
    G       | | | +                 T T
    G       G A G T
      C T A        A     AAGTC
                    T - A
                    A - T
                    T - A
                    G + T
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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