The detailed information of tRNA gene sequence


Sequence ID>WENV170220498
Genome IDCEPZ01175053
Search identical group
Phylum/Class[CEPZ] marine metagenome genome assembly TARA_039_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 473
End posion on genome 399
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position
tttttttaaT
tRNA gene sequence
GGGACTGTGGGGTAGCCTGGTAGCCTATGACGTTTGGGACGTCATGACCCCGGTTCAAAT
CCGGGCAGTCCCATag
Downstream region at tRNA end position
agagcaaatt
Secondary structure (Cloverleaf model)
>WENV170220498	Pro	TGG
                   T      ATag agagcaaatt
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     T - A
                     G - C          T A
                    T     G G G C C     A
      C G A        G      | | | | |     A
    C       T G G G       C C C G G     C
    T       + | | +                 T T
    G       G C C T
      G T A        A     TGAC
                    T - A
                    G - C
                    A - T
                    C - G
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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