The detailed information of tRNA gene sequence


Sequence ID>WENV170220668
Genome IDCEPZ01192338
Search identical group
Phylum/Class[CEPZ] marine metagenome genome assembly TARA_039_MES_0.1-0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 739
End posion on genome 812
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position
tcttaattcT
tRNA gene sequence
GGCTCAGTAGCTCAGTGGTAGATCGCCTGTCTCATAAGCAGGAGGCCGGGAGTTCAATTC
TCCCCTGAGCCATtt
Downstream region at tRNA end position
tattttttta
Secondary structure (Cloverleaf model)
>WENV170220668	Met	CAT
                   T      ATtt tattttttta
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     A - T
                     G - C          T T
                    T     C C C T C     A
        G A        A      | | | | |     A
      T     C T C G       G G G A G     C
      G     | |   |                 T T
      G     G A T C
        T A        G     AGGCC
                    C - G
                    C - G
                    T - A
                    G - C
                    T + G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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