The detailed information of tRNA gene sequence


Sequence ID>WENV170221133
Genome IDCEQA01000168
Search identical group
Phylum/Class[CEQA] marine metagenome genome assembly TARA_041_DCM_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 755
End posion on genome 831
Amino Acid Ile
Anticodon TAT
Upstream region at tRNA start position 
gccgacaccg
tRNA gene sequence 
GGGGAATTAGCTCAGTAGGTAAGAGCAGGGGTCTTATATGCCTCAGGTCATGGGTTCAAG
TCCCGTATTCCCTACCA
Downstream region at tRNA end position 
agtcaggcgt
Secondary structure (Cloverleaf model)
>WENV170221133	Ile	TAT
                   g      ACCA agtcaggcgt
                     G + T
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T
                     T - A          T G
                    T     T G C C C     A
      T G A        A      | + | | |     A
    A       C T C G       A T G G G     C
    G       | | | |                 T T
    G       G A G C
      T A A        A     AGGTC
                    G - C
                    G + T
                    G - C
                    G - C
                    T + G
                  C       T
                  T       A
                    T A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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