The detailed information of tRNA gene sequence


Sequence ID>WENV170221176
Genome IDCEQA01016321
Search identical group
Phylum/Class[CEQA] marine metagenome genome assembly TARA_041_DCM_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 3058
End posion on genome 2984
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position
ctaacaatat
tRNA gene sequence
AGCGACGTGGAGAAGTGGTATCTTGCTGGGCTCATAACCCAGAGGTCGGCGGTTCGAGTC
CGCCCGTCGCAACTA
Downstream region at tRNA end position
tgagaaaagt
Secondary structure (Cloverleaf model)
>WENV170221176	Met	CAT
                   t      ACTA tgagaaaagt
                     A   A
                     G - C
                     C - G
                     G - C
                     A - T
                     C - G
                     G - C          T G
                    T     C C G C C     A
        G A        G      | | | | |     G
      T     A G A G       G G C G G     C
      G     | | | +                 T T
      G     T C T T
        T A        G     AGGTC
                    C - G
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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