The detailed information of tRNA gene sequence


Sequence ID>WENV170221195
Genome IDCEQA01019837
Search identical group
Phylum/Class[CEQA] marine metagenome genome assembly TARA_041_DCM_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 266
End posion on genome 193
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
taattaatat
tRNA gene sequence 
GGGGCTGTAGTTCAGTTGGGAGAACGCCTCCCTTGCACGGAGGAGGTCGCTGGTTCGAGT
CCAGTCAGCTCCACtt
Downstream region at tRNA end position 
aaatgtggtg
Secondary structure (Cloverleaf model)
>WENV170221195	Ala	TGC
                   t      ACtt aaatgtggtg
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     G - C          T G
                    T     T G A C C     A
      T G A        A      + | | | |     G
    T       C T T G       G C T G G     C
    G       | | | |                 T T
    G       G A A C
      G A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    C - G
                    C - G
                  C       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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