The detailed information of tRNA gene sequence


Sequence ID>WENV170221244
Genome IDCEQA01033324
Search identical group
Phylum/Class[CEQA] marine metagenome genome assembly TARA_041_DCM_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 14849
End posion on genome 14773
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position
accaattaat
tRNA gene sequence
CTCCCGGTAGCTCAATGGACTAGAGCAAAAGGTTTCTACCCTTTAGGTTGGGGGTTCGAG
TCCCTCTCGGGAGGCCA
Downstream region at tRNA end position
aataaaggtt
Secondary structure (Cloverleaf model)
>WENV170221244	Arg	TCT
                   t      GCCA aataaaggtt
                     C - G
                     T - A
                     C - G
                     C - G
                     C - G
                     G - C
                     G + T          T G
                    T     C T C C C     A
      T A A        A      | + | | |     G
    G       C T C G       G G G G G     C
    G       | | | |                 T T
    A       G A G C
      C T A        A     AGGTT
                    A - T
                    A - T
                    A - T
                    G - C
                    G - C
                  T       C
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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