The detailed information of tRNA gene sequence


Sequence ID>WENV170221318
Genome IDCEQA01075613
Search identical group
Phylum/Class[CEQA] marine metagenome genome assembly TARA_041_DCM_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 169
End posion on genome 93
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ttcttagtta
tRNA gene sequence 
GGGGGTATAGCTCAGTTGGTTAGAGCGCTAGCCTGTCACGCTAGAGGTCACGGGTTCAAG
TCCCGTTGCTCCCGCCA
Downstream region at tRNA end position 
caaaccatta
Secondary structure (Cloverleaf model)
>WENV170221318	Asp	GTC
                   a      GCCA caaaccatta
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     T + G
                     A - T          T G
                    T     T G C C C     A
      T G A        A      | | | | |     A
    T       C T C G       A C G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    T - A
                    A - T
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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