The detailed information of tRNA gene sequence


Sequence ID>WENV170221394
Genome IDCEQA01126708
Search identical group
Phylum/Class[CEQA] marine metagenome genome assembly TARA_041_DCM_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 89
End posion on genome 174
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cttacaaact
tRNA gene sequence 
GGAGAAGTGACCGAGTGGTTTAAGGTATCGGTCTTGAAAACCGACGTGTCGAAAGGCACC
GTGAGTTCGAATCTCACCTTCTCCGCtt
Downstream region at tRNA end position 
ttaaccttag
Secondary structure (Cloverleaf model)
>WENV170221394	Ser	TGA
                   t      GCtt ttaaccttag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     C A C T C     A
      T G A        G      | | | | |     G
    G       G C C A       G T G A G     C
    G         | | |                 T T
    T       A G G T
      T T A        A     CGTGTCGAAAGGCACC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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