The detailed information of tRNA gene sequence


Sequence ID>WENV170221410
Genome IDCEQA01133606
Search identical group
Phylum/Class[CEQA] marine metagenome genome assembly TARA_041_DCM_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1210
End posion on genome 1287
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gaattactat
tRNA gene sequence 
AGCGGAGACGAGCCTTGGTAGGCTAATGAGTCTCATAAACTCACCCAATTGCTAGTTCGA
TTCTAGCCTCCGCAACTA
Downstream region at tRNA end position 
aactattgga
Secondary structure (Cloverleaf model)
>WENV170221410	Met	CAT
                   t      ACTA aactattgga
                     A   A
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T T
                    A     C G A T C     A
      T T C        C      | | | | |     G
    G       C G A G       G C T A G     C
    G       | | |                   T T
    T       G C T A
      A G          A     CCCAATT
                    T - A
                    G - C
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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