The detailed information of tRNA gene sequence


Sequence ID>WENV170221423
Genome IDCEQA01137025
Search identical group
Phylum/Class[CEQA] marine metagenome genome assembly TARA_041_DCM_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 589
End posion on genome 675
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tttattgttt
tRNA gene sequence 
GGAGAGGTGCCGGAGTGGTAACGGAGCAGATTGCTAATCTGTCAGCGCGTAAGTGCTGCC
CGGGTTCGAGTCCCGGTCTCTCCGCAA
Downstream region at tRNA end position 
aaaaaatcac
Secondary structure (Cloverleaf model)
>WENV170221423	Ser	GCT
                   t      GCAA aaaaaatcac
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T G
                    T     G G C C C     A
        G A        G      | | | | |     G
      T     G G C C       C C G G G     C
      G       | | |                 T T
      G     A C G G
        T A        A     CAGCGCGTAAGTGCTGC
                    G + T
                    C - G
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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