The detailed information of tRNA gene sequence


Sequence ID>WENV170221429
Genome IDCEQA01137972
Search identical group
Phylum/Class[CEQA] marine metagenome genome assembly TARA_041_DCM_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 241
End posion on genome 168
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position
ctcctacaat
tRNA gene sequence
CGCGGGGTGGTCAAACGGCAAGACGGTTCTCTGCAAAAGAACAATTGAGGGTTCGATTCC
CTCCCTCGCGTCCA
Downstream region at tRNA end position
atttaaaaaa
Secondary structure (Cloverleaf model)
>WENV170221429	Cys	GCA
                   t      TCCA atttaaaaaa
                     C - G
                     G - C
                     C - G
                     G - C
                     G + T
                     G - C
                     G - C          T T
                    T     C T C C C     A
        A A        G      | | | | |     G
      C     A C T G       G A G G G     C
      G       | | |                 T T
      G     A G A C
        C A        G     AATT
                    G - C
                    T - A
                    T - A
                    C - G
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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