The detailed information of tRNA gene sequence


Sequence ID>WENV170221481
Genome IDCEQB01007698
Search identical group
Phylum/Class[CEQB] marine metagenome genome assembly TARA_052_DCM_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 2356
End posion on genome 2280
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tattatacac
tRNA gene sequence 
GGGCTCTTAGCTCAGTTGGTTAGAGCCCCCCGCTCATAACGGGGTAGTCCTCGGTTCGAG
TCCGAGAGAGCCCACCA
Downstream region at tRNA end position 
aataaggaga
Secondary structure (Cloverleaf model)
>WENV170221481	Met	CAT
                   c      ACCA aataaggaga
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     T - A          T G
                    T     G A G C C     A
      T G A        A      | | | | |     G
    T       C T C G       C T C G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        C     TAGTC
                    C - G
                    C - G
                    C - G
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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