The detailed information of tRNA gene sequence


Sequence ID>WENV170221551
Genome IDCEQB01036489
Search identical group
Phylum/Class[CEQB] marine metagenome genome assembly TARA_052_DCM_0.22 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1737
End posion on genome 1661
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position
tcttttttta
tRNA gene sequence
GGGCCTTTAGCTCAGTTGGTCAGAGCATCCGACTCATAATCGGCAGGTCGTCAGTTCGAG
TCTGACAAGGCCCACCA
Downstream region at tRNA end position
acttatttgt
Secondary structure (Cloverleaf model)
>WENV170221551	Met	CAT
                   a      ACCA acttatttgt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     T - A          T G
                    T     C A G T C     A
      T G A        A      | | | | |     G
    T       C T C G       G T C A G     C
    G       | | | |                 T T
    G       G A G C
      T C A        A     AGGTC
                    T   C
                    C - G
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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