The detailed information of tRNA gene sequence


Sequence ID>WENV170222188
Genome IDCEQD01010221
Search identical group
Phylum/Class[CEQD] marine metagenome genome assembly TARA_042_SRF_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 262
End posion on genome 170
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tgggcagcat
tRNA gene sequence 
GGAGGTGTCGCCTAGTGGCCTATGGCGCCCGCCTGCTAAGCGGGTTGGGAGTTTGAAGCT
CCCTCGAGGGTTCAAATCCCTCCACCTCCGCCG
Downstream region at tRNA end position 
cgaaacgccc
Secondary structure (Cloverleaf model)
>WENV170222188	Ser	GCT
                   t      GCCG cgaaacgccc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     C T C C C     A
      T G A        C      | | | | |     A
    G       T C C G       G A G G G     C
    G         | | |                 T T
    C       T G G C
      C T A        G     TTGGGAGTTTGAAGCTCCCTC
                    C - G
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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