The detailed information of tRNA gene sequence


Sequence ID>WENV170224959
Genome IDCEQE01101140
Search identical group
Phylum/Class[CEQE] marine metagenome genome assembly TARA_037_MES_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 191
End posion on genome 95
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position
ggccttggtt
tRNA gene sequence
GGAAGCGCATAGGGTTCCGGTGTCCCTCCTGGACTTCAAATCCAGTGTTCCGGCTTAACC
CCCGGTAGGTGGGTTCGACTCCCACGCGCTTCCGCCA
Downstream region at tRNA end position
ttttatcttt
Secondary structure (Cloverleaf model)
>WENV170224959	SeC(p)	TCA
                   t      GCCA ttttatcttt
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C
                     C - G          T C
                    A     C A C C C     A
      C T T        T      | | | | |     G
    C       G G G A       G T G G G     C
    G       | | | |                 T T
    G       C C C T
      T G T        C     TGTTCCGGCTTAACCCCCGGTAG
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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