The detailed information of tRNA gene sequence


Sequence ID>WENV170225114
Genome IDCEQE01109564
Search identical group
Phylum/Class[CEQE] marine metagenome genome assembly TARA_037_MES_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 513
End posion on genome 439
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
cggattcgga
tRNA gene sequence 
GGGGCGTTAGCTCAGCGGCAGAGCGCTGTCCTCACACGGCAGATGTCAGTGGTTCAAATC
CACTACGCCCCACCA
Downstream region at tRNA end position 
aattttcccc
Secondary structure (Cloverleaf model)
>WENV170225114	Val	CAC
                   a      ACCA aattttcccc
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     T - A          T A
                    T     T C A C C     A
        G A        A      | | | | |     A
      C     C T C G       A G T G G     C
      G     | | | |                 T T
      G     G A G C
        C A        G     ATGTC
                    C - G
                    T - A
                    G - C
                    T + G
                    C - G
                  C       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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