The detailed information of tRNA gene sequence


Sequence ID>WENV170225309
Genome IDCEQE01127863
Search identical group
Phylum/Class[CEQE] marine metagenome genome assembly TARA_037_MES_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 395
End posion on genome 320
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
ttttacgaga
tRNA gene sequence 
GCCCGTATAGCTCAGTTGGTAGAGCGCTTCCATGGTAAGGAAGAGGTCGCAAGTTCAATT
CTTGCTGCGGGCACCA
Downstream region at tRNA end position 
catctgtttt
Secondary structure (Cloverleaf model)
>WENV170225309	Thr	GGT
                   a      ACCA catctgtttt
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     T + G
                     A - T          T T
                    T     C G T T C     A
      T G A        A      | | | | |     A
    T       C T C G       G C A A G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    C - G
                  A       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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