The detailed information of tRNA gene sequence


Sequence ID>WENV170226208
Genome IDCEQE01277867
Search identical group
Phylum/Class[CEQE] marine metagenome genome assembly TARA_037_MES_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 147
End posion on genome 73
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position
tatccatgca
tRNA gene sequence
GGGCGATTAGCTCAGCTGGTCAGAGCGCTGTCTTCACACGGCAGAGGTCGGCAGTTCGAA
CCTGCCATCGCCCACgt
Downstream region at tRNA end position
cttggcccgt
Secondary structure (Cloverleaf model)
>WENV170226208	Val	CAC
                   a      ACgt cttggcccgt
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A          C A
                    T     C C G T C     A
      C G A        A      | | | | |     G
    T       C T C G       G G C A G     C
    G       | | | |                 T T
    G       G A G C
      T C A        G     AGGTC
                    C - G
                    T - A
                    G - C
                    T + G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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