The detailed information of tRNA gene sequence


Sequence ID>WENV170227010
Genome IDCEQF01036861
Search identical group
Phylum/Class[CEQF] marine metagenome genome assembly TARA_068_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1336
End posion on genome 1410
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaggcaaaat
tRNA gene sequence 
GGCGGCGTAGCTCAGCTGGTTAGAGCACCGGAATCATAATCCGGGTGTCCGGGGTTCGAG
TCCCTGCGCCGCTACat
Downstream region at tRNA end position 
taaattctca
Secondary structure (Cloverleaf model)
>WENV170227010	Met	CAT
                   t      ACat taaattctca
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     G T C C C     A
      C G A        A      | + | | |     G
    T       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GTGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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