The detailed information of tRNA gene sequence


Sequence ID>WENV170227412
Genome IDCEQF01081956
Search identical group
Phylum/Class[CEQF] marine metagenome genome assembly TARA_068_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 235
End posion on genome 162
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position
ataagtttct
tRNA gene sequence
AGGAGTGTAGTTCAATTGGTAGAGCGTCGGCCTCCAAAGCCGAAAGTTGAGGGTTCGAGT
CCTTCCACTCCTGCac
Downstream region at tRNA end position
acgttagggt
Secondary structure (Cloverleaf model)
>WENV170227412	Trp	CCA
                   t      GCac acgttagggt
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C          T G
                    T     C T T C C     A
      T A A        A      | | + | |     G
    T       C T T G       G A G G G     C
    G       | | + |                 T T
    G       G A G C
      T A          G     AAGTT
                    T - A
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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