The detailed information of tRNA gene sequence


Sequence ID>WENV170227415
Genome IDCEQF01082288
Search identical group
Phylum/Class[CEQF] marine metagenome genome assembly TARA_068_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 194
End posion on genome 108
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position
aacactccgt
tRNA gene sequence
GCCGGAGTGGTGAAACTGGCAGACGCGCGGGACTCAAAATCCCGTGGACTTCGGTCCGTG
TGGGTTCGACCCCCACCTCCGGCACCA
Downstream region at tRNA end position
ttactttcaa
Secondary structure (Cloverleaf model)
>WENV170227415	Leu	CAA
                   t      ACCA ttactttcaa
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          C C
                    T     C A C C C     A
      C A A        G      | | | | |     G
    T       A G T G       G T G G G     C
    G         | + |                 T T
    G       A C G C
      C A G        G     TGGACTTCGGTCCGT
                    C - G
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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