The detailed information of tRNA gene sequence


Sequence ID>WENV170227497
Genome IDCEQF01094213
Search identical group
Phylum/Class[CEQF] marine metagenome genome assembly TARA_068_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 269
End posion on genome 194
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position
cacctactgt
tRNA gene sequence
GGCCCGGTGGTGTAGCGGTTAACATATTGGCCTGTCAAGCCAAAGATCGGCGGTTCGAAT
CCGCTCCGGGTCGCCA
Downstream region at tRNA end position
ctaatccgtt
Secondary structure (Cloverleaf model)
>WENV170227497	Asp	GTC
                   t      GCCA ctaatccgtt
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     T C G C C     A
      C G A        G      + | | | |     G
    G       T G T G       G G C G G     C
    G       | | | +                 T T
    T       A C A T
      T A          A     AGATC
                    T - A
                    T - A
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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