The detailed information of tRNA gene sequence


Sequence ID>WENV170227803
Genome IDCEQF01137813
Search identical group
Phylum/Class[CEQF] marine metagenome genome assembly TARA_068_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1471
End posion on genome 1567
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
ttggttttcc
tRNA gene sequence 
GGGAGTGTACGCGGATCTGGTGACCGCCCTGGGCTTCAAACCCAGTGTGGCGTCTGAAAA
GTCGCCAGGTGGGTTCGATTCCCATCCACTCCCGCTA
Downstream region at tRNA end position 
gcgggtttcg
Secondary structure (Cloverleaf model)
>WENV170227803	SeC	TCA
                   c      GCTA gcgggtttcg
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C
                     T   C          T T
                    A     T A C C C     A
      C T A        C      + | | | |     G
    T       G G C G       G T G G G     C
    G       | | | |                 T T
    G       C C G C
      T G A        C     TGTGGCGTCTGAAAAGTCGCCAG
                    C - G
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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