The detailed information of tRNA gene sequence


Sequence ID>WENV170228363
Genome IDCEQG01004703
Search identical group
Phylum/Class[CEQG] marine metagenome genome assembly TARA_076_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 31716
End posion on genome 31640
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ggtgcgggtg
tRNA gene sequence 
GGGCCTGTAGCTCAATTGGTTAGAGCCGGCGGCTCATAACCGCTTGGTTGGGGGTTCGAG
TCCCTCCGGGCCCACCA
Downstream region at tRNA end position 
ttgtccgttt
Secondary structure (Cloverleaf model)
>WENV170228363	Met	CAT
                   g      ACCA ttgtccgttt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T G
                    T     C T C C C     A
      T A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        C     TGGTT
                    G + T
                    G - C
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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